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Moral would be too harsh to describe it---and inappropriate too. Should the parents (with history of autoimmune disease) decides to have kids, they know the risks that they would pass on the genes are high. It's the same thing as other hereditary diseases such as diabetes for instance yet we are not calling diabetic parents as immoral, right? It might not be as severe as an autoimmune disease but diabetes may be fatal and as cumbersome.
Also, genes are only partly to blame for autoimmune disease. Individuals may get it whether they have familial history or not.
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